Thursday, April 19, 2012

Community Ecology Study Resources

Here are a few resources for additional information regarding topics covered in this section of lecture.

 

Community Interactions

(Scitable, predator-prey link)



Mighty Mutualisms: Plant-pollinator Interactions

Neat Virtual Lab comparing interspecific competition between Paramecium spp. in a fashion similar to Gause's experiment (note: you may want to record your data table on paper)

 

Community composition
(Scitable, succession link)


Characterizing communities: richness, evenness, and diversity

Succession: community change through time

Disturbance & Diversity

Community Ecology - a general gateway for exploring related topics.

Biomes of the world - typical climates and common species.

 

Monday, April 2, 2012

Midterm 2 Study Resources

As you prepare for your upcoming midterm exam, here are some helpful study links (in addition to Sakai resources and my earlier blog postings):
  • Exam taking tips
  • How to read scientific articles & graphs (PDF)
  • Shappell.Ecology website footer help links
  • Quizlet
  • VisionLearning has a free science glossary App for iPhones/iPads (I don't have an iPhone/iPad so if you try this App, please let me know how helpful it is!)
  • Popplet - for the visual and concept-oriented learners, you may want to give this site a try.  Popplet lets you make interactive concept maps using words, diagrams and videos - see basic example below.


  • In addition to the lecture notes, remember to review the assigned articles/activities, section outlines, and glossary terms in your Packet.
The upcoming midterm only includes information from the Ecosystems and Population Ecology sections of lecture.

Quizlet
At this point, nearly all of the terms in Ecosystem and Population Ecology glossaries have been discussed.  Within the Principles of Ecology 2012 study group on Quizlet, I have started two flashcard "sets", one for vocabulary/terms and one for general concepts.

To add flashcard terms to the sets: you must first make a Quizlet profile (this may be done anonymously) and join the study group.

Quizlet has other neat games to help you learn the vocabulary, such as the one below, but it is the responsibilities of you, the student, to build this study resource

A word of Quizlet warning: If you do add terms to the set you are presented with the "auto-define" option - please make sure the definition you choose matches the one in your packet!  Same thing goes for those of you using Quizlet to study, check the definitions against your glossary the first time through.  

While you all are studying in the coming week, I will be grading your reports.  Therefore, I need you all to "self-police/correct" on Quizlet, but feel free to email me if a major problem arises.


Sunday, April 1, 2012

TED Video & Conservation Resources

Here are some interesting resources related to what we have recently learned regarding wildlife conservation.
(Australian Government, Fisheries Mgmt.)

Be mindful of what you eat!
Get the Monterey Bay Aquarium Seafood Watch App available for Android and iPhone users (pictured below).  

Don't have a "smart"phone?  
Print a pocket guide!




Video: Turtle Excluder Device (TED) in action! 

(Video source: National Geographic)

Another neat "smart"phone App: 
Rutgers new iPhone App (beta) includes bus arrival times (Android App due out fall 2012).

Population Growth: A Mini-Review of Key Concepts

This blog post provides a few resources that should help you review some of the difficult population ecology concepts.  Here a few websites to get you started: 

Let's start with the basics: Exponential Growth
(Knowledge Library, Nature.com)

Exponential growth is a type of population growth in which the rate of increase in the number of members is proportional to the number present.


To model exp. growth we use the below formula:

  N(t)= N(0)*(e^(R*t)) 

Where (N(0)): initial population size; (N(t)): the projected population size; R: intrinsic growth rate; and t: an arbitrary time. 
The figure (above right) depicts the extent to which rate (R) affects population size over time (t), given we know the population size at t initial. Note the "J-shaped" growth curve.  (I have not figured out how to use super-/sub-scripts in blogger, sorry!)

Geometric Growth Model

Geometric growth model (equation below) expands upon the exponential growth model by including time (t) as a variable.  Including time as a variable is important for species that have defined growth periods (e.g., breeding season).  

N(t)= N(0)*(R^(t))


When R>1 the population is increasing; R<1 pop. decreasing; R=1 no change in pop. size.

For a more detailed description of how the above equation is derived, and assumptions associated with some of these models visit this website. 
 
Density Dependence

(Knowledge Library, Nature.com)
In the natural world, competition and resource availability limit population growth - this is described as carrying capacity (K).  That is, an environment or ecosystem is only able to support, or "carry", a maximum population size. As the population size approaches carrying capacity, the growth rate slows.  Population growth rate (R) is highest at the inflection point [K/2], after which the growth rate decreases toward zero as N nears K. 

Density dependent factors affecting population size, such as competition or predation are often biotic, whereas density independent limitations are often abiotic, such as environmental stress


Logistic Population Growth

This equation is density dependent, that is, as the population increases, intraspecific competition increases.  The logistic growth model is a common sigmoid curve or "S-shaped" curve, as seen in the carrying capacity graph above.   

(Knowledge Library, Nature.com)
To find the change in population size over time (dN/dt) while accounting for carrying capacity (K) we use the following equation ("Equation 8").  Where N = population size and r = rate of population change.    


The Allee Effect, or Inverse Density Dependence at Low Density

This effect states that for certain species, when their population is at low densities, there is a positive relationship between population growth rate and density.  That is, decreased population growth is correlated with decreasing abundance, which can result in the population's extinction.  This critical threshold (R=1), or Allee threshold, is the tipping point for a population's survival.
(Ann. Rev. in Ento., 2008)
The many factors that may lead to the Allee Effect have been loosely categorized as follows:
1) Genetic Inbreeding - leading to decreased fitness 
2) Demographic Stochasticity (e.g., sex-ratio fluctuations, or low fecundity)  
3) Reduced intraspecific cooperation when densities are low
In practice, the Allee effect is of concern to conservation biologist.  Instances such as  managing rare species, monitoring species re-introductions, or preventing the establishment of non-native invasive species all  involve small population sizes.  

The most informative description I have found of this phenomenon online (and my source for information) is in this short article by Courcham et al. (1999) published in the scientific journal Trends in Ecology and Evolution (PDF).  


Lotka-Volterra competition model  
Note: The L-V model is Community Ecology and will be included on the final exam.

This model builds on the logistic growth model, by adding a competition coefficient, accounting for a species' ability to inhibit the growth of another (interspecific competition).  The equations below are the logistic growth model as discussed above for individual species (species 1, species 2), but a competition coefficient has been added. 

Competition coefficients may be denoted as alpha or beta, or as in this example, subscripts on the alpha are different.  This coefficient represents the degree to which their competitor may inhibit their growth (alpha) and the size of the competitor's population (N). 
 
(Townsend et al. 2008. Ecology)